VARIANT RANKER

Examples

 
P A R A M E T E R S
SNP info


1000g 1000g2012apr_all 1000g2012apr_eur 1000g2012apr_asn 1000g2012apr_amr 1000g2012apr_afr
1000g 1000g2014sep_all 1000g2014sep_eur 1000g2014sep_eas 1000g2014sep_amr 1000g2014sep_afr 1000g2014sep_sas
ExAC ExAC03
ESP6500 esp6500_ea esp6500_aa
PopFreqMax PopFreqMax
Func.refgene





Func.refgene


Func.ensGene





Func.ensGene


ExonicFunc.refgene





ExonicFunc.ensGene





Polyphen2_HDIV





Polyphen2_HVAR





SIFT



LRT



LR



MutationTaster



MutationAssessor



RadialSVM



FATHMM



gwasCatalog

EncodeRegTfbs

EncodeRegDnase

tfbsConsSites

phastConsElements

GERP++

PhyloP placental

PhyloP vertebrate

SiPhy

evofold

clinvar

Sample Identifier: e-mail:

NB: weights are set between 0 and 1. Hover mouse on checkbox headers for more information.
Refer TUTORIAL for file formats [ANNOVAR(.txt extension)/VCF]